Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL-ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P-------PGSTVRHLLAHTSGLAMHSD-----------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGG-----------------------PAAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSP-----------------HWTG-----ECNSTRTFGHFGQ---SGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 2FFY Chain:A ((12-344)) | -TITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINEKTLQQGIQLAQSRY-------WQTGDMYQGLGWEMLDWPVNPDSIINGSDAKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137689 for 2107 contacts (-65.3/contact) +
2D Compatibility (PS) -26557 + (NN) -13265 + (LL) 1692
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -189419.0 ( -89.90 by residue)
QMean score : 0.400
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