Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYVAAEPGVLISPTDDLQSP-RSAP-AAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQE-GFLVRPF-TQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGV-RAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAI-LGVPSSLNC-YHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
| 4G3A Chain:A ((5-231)) | ------KP----SDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSI------------VCTDMGFLIDGLMP------WLTGSHFKIAQKSLEAF--SELIKRLG----SDFNA----YTATVLPHVIDRLGDSRDTVREKAQLLLRDLMEHRVLPPQALIDKLATSC-----FKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -421 for 1657 contacts (-0.3/contact) +
2D Compatibility (PS) -22849 + (NN) -5067 + (LL) 4764
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -32123.0 ( -19.39 by residue)
QMean score : 0.211
|
|
|