Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA---DGKPADLVNFSVEPDIARLVKAGKVDK--D--WDAD--A--------TKGIPFGSVVTFVVRAGNPK--NIRDWDDLLRPGIE--VITPSPLSSGSAKWNLLAPYAAKSDGGRNNQAGIDFVNTLVNEHVKL-RPGSGREATDVFVQGSGDVLISYENEAIATERAG--------KPVQHVTPPQ------TFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 2VOZ Chain:A ((34-309)) | -------------------------------------------------------RTINLYSSRHY-NTDDALYDAFGE------VNLIEA--SAEELIERIQSEGANSPGDILFTVDAGMLWRAEQAGLFQPVRSGKLNERIPENLRHPDGLWYGFT-QRARVLYYSRDRVNPADLSTYEALADPQWRGKILVR-PSSNVYNL-SLTASRIA--IHG--EPETRRWLQGL-VGNFARQPEGNDTAQIRAIAAGIGDVAIANSYYYIRLQKSTDPADQEVVEKVSLFFPNTGSGERGTHVNVSGAGVLKNAPNRDAAIAFLEYLASDDAQRYFAEGNNEYPVIPGVPI--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67495 for 1896 contacts (-35.6/contact) +
2D Compatibility (PS) -26451 + (NN) -10394 + (LL) 5724
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -108016.0 ( -56.97 by residue)
QMean score : 0.394
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