Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGF---PCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVSYIPTALNVSMGGIVGWRCVP------------------------------------------------------------- |
1F16 Chain:A ((1-192)) | MDGSGEQPRGGGPTS--SEQIMKTGALLLQGFIQDRAGRMGGEAPELA--LDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVDT--DSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGVLTASLTIWKKMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39991 for 662 contacts (-60.4/contact) +
2D Compatibility (PS) -12670 + (NN) 2902 + (LL) 116
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -49243.0 ( -74.39 by residue)
QMean score : -0.009
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