Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKVRDIE---VNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGL-PAELAKAATSDAYDNALRKSHHAGMDAVGEDVG---TPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD |
| 3BD2 Chain:A ((14-177)) | ------GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKD-----------SIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDQNKEWLT---KELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPY------------------DYESYEKLLK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74328 for 1242 contacts (-59.8/contact) +
2D Compatibility (PS) -16247 + (NN) 964 + (LL) 2768
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -92043.0 ( -74.11 by residue)
QMean score : 0.464
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