Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFG----FADCIDLLANYTALCIDEFELD--DPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFA-AQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 5BQ5 Chain:A ((38-182)) | -------------------------------------------------------------------------------------------------RKENILFLGPPGIGKTHLAISIGMEAIAR-----GYKTYFITAHDLVNQLRRADQEGKLEKKLRVFVKPTVLIIDEMGYLKLDPNSAHYLFQVIARRYE-HAPIILTSNKSFGEWGEI-VGDSVLATAMLDRLLHHSIIFNLKGESYRLREK------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30670 for 973 contacts (-31.5/contact) +
2D Compatibility (PS) -14148 + (NN) -5033 + (LL) 16464
1D Compatibility (HY) 2000 + (ID) 700
Total energy: -32087.0 ( -32.98 by residue)
QMean score : 0.100
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