Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDA-------------------DLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASE-------HADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPLATEA |
4P5A Chain:A ((9-234)) | ---RSDITVELVDSSA--------------SD-LAVVKAARVSTA--------GGSTRGLIRYLMRSRHGSPFEHNSMTFLVR-APIFTVRHLMRHRTWSFNEESARYREVG-AAFYVPDATRLLRQEGKPGDYRYVGGSTDDHQQVVRSATRAYEVAFEEYQRLLD---------------SGIAREIARLVLPVSTYSVLYATCNARALMHFLSLRTHRPDAAYVSHPQREIEMVAEQMETAWAKLMPVTHEAFTAF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106971 for 1379 contacts (-77.6/contact) +
2D Compatibility (PS) -20437 + (NN) -6774 + (LL) 2732
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -141200.0 ( -102.39 by residue)
QMean score : 0.499
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