Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDAG-D-----P-----------------LSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFF---DSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGAD-VDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH
4YWJ Chain:A ((11-275))-RIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPLSGDLGKV-CEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAA--KD-IPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQ--EVAVYGREGQTGARARETIGFATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARGAVRAALWLEGKENGLYDMQDVLGL-


General information:
TITO was launched using:
RESULT:

Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165913 for 1868 contacts (-88.8/contact) +
2D Compatibility (PS) -26019 + (NN) -12404 + (LL) 340
1D Compatibility (HY) -13600 + (ID) 3800
Total energy: -221396.0 ( -118.52 by residue)
QMean score : 0.666

(partial model without unconserved sides chains):
PDB file : Tito_4YWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YWJ-query.scw
PDB file : Tito_Scwrl_4YWJ.pdb: