Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESLRSLPGCHLLVR---PEVMRRDVDLVVTVDIPSVDRLGALGDLTDSGRELLVIDHHASNDL--FGTANFIDPSADSTTTMVAEILDAWGKPIDPRVAHCIYAGLATDTGSFRW--ASVRGYRLAARLVEI-GVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVGGR-GLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVF--KEVEPHRWSVSMRAKTVNLAAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG- |
| 1K20 Chain:A ((1-310)) | ---------------------------------SKILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQQSV---ADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKEHSVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVNLEEYGLAMLKAGTNLASKSAEELIDIDAKTFELNGNNVRVAQVNTVDIAEVLERQAEIEAAIEKAIADNGYSDFVLMITDIINSNSEILAIGSNMDKVEAAFNFVLENNHAFLAGAVS--RKKQVVPQLTESFNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158212 for 2629 contacts (-60.2/contact) +
2D Compatibility (PS) -32060 + (NN) -10552 + (LL) 2464
1D Compatibility (HY) -3200 + (ID) 2150
Total energy: -203710.0 ( -77.49 by residue)
QMean score : 0.344
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