Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYG----------EFSTREGEIVA--------GVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVT------RGAREPLIT-----LSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSK-------IAVRSNVAGLNAKGACIGPMGQRVRN----VMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVV--VPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
4B3X Chain:A ((1-363)) | --MAKVRIYQLAKELGMETQELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQRGAKVADIAVIVIA----ADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDADGNQRKEAG----PGSAVQVLGFQELPHAGDVVEWVPDLEAAKEIAEERKEERKARE---------EEEKARRPRTMAELLR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63856 for 2220 contacts (-28.8/contact) +
2D Compatibility (PS) -34452 + (NN) -10495 + (LL) 1704
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -114649.0 ( -51.64 by residue)
QMean score : 0.275
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