Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG---FDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHGEHGVAGPWAAG-AQRGQPIYLMGPGGAYAPDPA-ADWHLLAGDESAIPAIAAALEALPP---DAIGRAFIEVAGPDDEIG---LT----APDAVEVNWVYRGGRADLVPEDRAGDH--APLIEA-VTTTAWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
1GVH Chain:A ((152-394)) | -----TRDFRIVAKTPRSALITSFELEPVDGGAVAEYRP----GQYLGVWLKPEGF--------------------PHQEIRQYSLTRKPD-GKGYRIAVKREE-GGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK---GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVG-FMQFTAKQLVD-LGVK-QENIHYECFGPHK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112466 for 1757 contacts (-64.0/contact) +
2D Compatibility (PS) -24391 + (NN) -6457 + (LL) 3792
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -148672.0 ( -84.62 by residue)
QMean score : 0.345
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