Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GPE-RRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 3W4Q Chain:A ((33-268)) | -----------------------------------------------------------------------------SFAALERA---AGGRLGVCAIDTATGRRALHRADERFPFCSTFKAMLGAAVLAQSVAHPGLLQQRVTYGRSDLVNYSPVTERHVDTGMTVAELCAATIQYSDNTAANELMKRIGGPAAVTAYARSIGDDTFRLDRWETELNTALPGDLRDTTTPAAMAANLRVLVLGD-ALPPAQRAQLIEWLRGN------KVG-DKRIRAGVPTGWRVGDKTGTGDYG-----TTNDVGVLWPPSRAPIVLAVYYTQT----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92942 for 1651 contacts (-56.3/contact) +
2D Compatibility (PS) -22294 + (NN) -13157 + (LL) 7916
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -126077.0 ( -76.36 by residue)
QMean score : 0.504
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