Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MAYLDHAATTPMHPAAIEAMAAVQRTI-GNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFG--VPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR |
1ECX Chain:A ((1-376)) | MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKR---KRTIITTPIEHKAVLETMKYLSM-KGFKVKYVPVDSRGVVKLEELEKLVD--EDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNL--GAHIITPLEI-SLPNTLSVSFPNIRGSTLQNLLSGYGIYVS------------THVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209518 for 3159 contacts (-66.3/contact) +
2D Compatibility (PS) -40048 + (NN) -22101 + (LL) 1936
1D Compatibility (HY) -24400 + (ID) 6600
Total energy: -300731.0 ( -95.20 by residue)
QMean score : 0.501
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