Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTSIPTFPFDRPVPTEPSPMLSELRNSCPVAPIELPSGHTAWLVTRFDDVKGVLSD--------------KRFSCRAAAHPSSPPFVPFVQLCPSLLSID-GPQHTAARRLLAQGLNPGFIARMRPVVQQIVDNALDDLAAAEP---PVDFQEIVSVPIGEQLMAKLL---GVEPKTVHELAAHVDAAM---SVCEIGDEEVSRRWSALCTMVIDILHRKLAEPGDDLLSTIAQANRQQS--TMTDEQVVGMLLTVVIGGVDTPIAVITNGLASLLHHRDQYERLVE-DPGRVARAVEEIVRFNPATEIEHLRVVTEDVVIAG-TALSAGSPAFTSITSANRDSDQF-LDPDEFDVER--NPNEHIAFGYGPHACPASAYSRMCLTTFFTSLTQRFPQLQLARPFEDLERRGKGLHSVGIKELLVTWPT-- |
| 1GWI Chain:A ((8-409)) | ARI-PLD--PFVT--DL--DGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLT-DPRLVKDINVWGAWRRGEIPA-----DWPLIGLANPGRSMLTVDG-AEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELP---ADGGVVDLKAAFAYPLPMYVVADLMGIE---EARLPRLKVLFEK-FFST---QTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQA-SEN-GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG-EAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVG-DRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS-GNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFE-LPVRLA-HH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259142 for 2944 contacts (-88.0/contact) +
2D Compatibility (PS) -39338 + (NN) -19467 + (LL) 768
1D Compatibility (HY) -18800 + (ID) 5550
Total energy: -341529.0 ( -116.01 by residue)
QMean score : 0.503
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