Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDAT--RRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQM--------SCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVA-NADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
| 1RQJ Chain:B ((44-266)) | --------------------------------------------------------------------GKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDR--DRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106280 for 1699 contacts (-62.6/contact) +
2D Compatibility (PS) -22897 + (NN) -14935 + (LL) 10344
1D Compatibility (HY) -9600 + (ID) 3800
Total energy: -147168.0 ( -86.62 by residue)
QMean score : 0.306
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