Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLAD-VQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALG---DMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
4WR3 Chain:C ((4-357)) | -----------------------------------ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADA--FGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEA--SLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQC--KNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQ------RSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGFGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKA-GDPVILWGEGLPVERIAE----MTKVSAYELITRLTSRVAMKY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201063 for 3005 contacts (-66.9/contact) +
2D Compatibility (PS) -37496 + (NN) -9703 + (LL) 3324
1D Compatibility (HY) -21200 + (ID) 6600
Total energy: -272738.0 ( -90.76 by residue)
QMean score : 0.407
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