Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGF-RAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1OFN Chain:B ((1-194))
MQARKLAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEAQRQGLLPDYTTSQEI-------
General information:
TITO was launched using:
RESULT:
Template:
1OFN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104039 for 1598 contacts (-65.1/contact) +
2D Compatibility (PS) -20527 + (NN) -9328 + (LL) 404
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -154040.0 ( -96.40 by residue)
QMean score : 0.779
(partial model without unconserved sides chains):
PDB file :
Tito_1OFN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFN-query.scw
PDB file :
Tito_Scwrl_1OFN.pdb
: