Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNT-LGDHVTATVELSMRDS
4W78 Chain:B ((1-124))
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWAGPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGLITVKVVGRNTLGDHV-TATVEL-----
General information:
TITO was launched using:
RESULT:
Template:
4W78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66681 for 891 contacts (-74.8/contact) +
2D Compatibility (PS) -13169 + (NN) -1908 + (LL) 368
1D Compatibility (HY) -17600 + (ID) 5950
Total energy: -104940.0 ( -117.78 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_4W78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W78-query.scw
PDB file :
Tito_Scwrl_4W78.pdb
: