Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSVSATTTDGLGLTGR-GEGLAAIATALVVSLR
1IV2 Chain:F ((2-138))
-----RIGYGEDSHRLEEGRPLYLCGLLIPSPVGALAHSDGDAAMHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREAMRLVEARGAKLLQASLVLTLDRPKLGPHRKALVDSLSRLMRLP-------QDRIGLTFKTSEGLA-----------
General information:
TITO was launched using:
RESULT:
Template:
1IV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98666 for 1011 contacts (-97.6/contact) +
2D Compatibility (PS) -15126 + (NN) -13747 + (LL) 2356
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -136433.0 ( -134.95 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1IV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IV2-query.scw
PDB file :
Tito_Scwrl_1IV2.pdb
: