Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSS-RAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGP-PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP-EAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRV-----LDVLGVN--DVGGAVTVGLAHYSTMAEVDQLVRALASLG |
| 4HVK Chain:A ((2-370)) | -------------------AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQ-KQGFEVEYIPVGK-YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAG-KAALHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAK---LQPVILGGGQ--ENGLRSGSENVPSIVGFGKAAEITA---------------MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTG-----QPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274996 for 3211 contacts (-85.6/contact) +
2D Compatibility (PS) -38897 + (NN) -21917 + (LL) 2440
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -352620.0 ( -109.82 by residue)
QMean score : 0.540
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