Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKRMVIGLSTGSDDDDVEVIGGVDPRLIAVQENDSDESSLTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDEASRNRLRDIHATSIRELEDGLAP--ELREELDRLTLPFNEDAVPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRQGALPPGVGKSGQHGHGTGQYL
1I6Z Chain:A ((85-219))
---------------------GSPEFMLIGEKSNPEEEVELKKLKDLEVSAEKIANHLQELNKELSGIQQGFLAKELQAEALCKLDRKVKATIEQFMKILEEIDTMVLP------EQFKDSRLKRKNLVKKVQVFLAECDTV--EQYICQETERLQSTNLALAE----------------
General information:
TITO was launched using:
RESULT:
Template:
1I6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22401 for 765 contacts (-29.3/contact) +
2D Compatibility (PS) -14944 + (NN) -8387 + (LL) 1860
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -48272.0 ( -63.10 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1I6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6Z-query.scw
PDB file :
Tito_Scwrl_1I6Z.pdb
: