Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNA---LRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHD--Q-PN-----LGGSGGYSRVMYEALKN-----TDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPAANQEPEHG |
| 1V84 Chain:A ((2-129)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------LPTIHVVTPTYSRPVQKAELTRMANTL-LHV----PNLHWLVVEDAPRRTP---LTARLLRDTGLNYTHLHVETPRNYKLRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47121 for 708 contacts (-66.6/contact) +
2D Compatibility (PS) -11230 + (NN) -2212 + (LL) 36688
1D Compatibility (HY) 2000 + (ID) 800
Total energy: -22675.0 ( -32.03 by residue)
QMean score : 0.441
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