Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFTDYRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDY-PTDKTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQYLDMHMAIASALNMYDNVLAPHLRDGVPLLQDGA |
1I8T Chain:B ((2-365)) | -------YDYIIVGSGLFGAVCANELK-KLNKKVLVIEKRNHIGGNAYTE--DCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVK-DPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEG--VDVKLGIDFLKDKDSL--ASKAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEFPNFQGNAVINFTDANVPYTRIIEHKHF----DYVETKHTVVTKEYPLEWKVGDEPYYPVNDNKNMELFKKYRELASRE---DKVIFGGRLAEYKYYDMHQVISAALYQVKNIMS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171862 for 2963 contacts (-58.0/contact) +
2D Compatibility (PS) -39374 + (NN) -17019 + (LL) 1856
1D Compatibility (HY) -39600 + (ID) 8250
Total energy: -274249.0 ( -92.56 by residue)
QMean score : 0.495
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