Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MIQVCSQCGTGWNVRERQRVWCPRCRGMLLAPLADMPAEARWRTP---ARPQVPTASDTRRTPPRLPPGFRWIAVRPGAAPP----PRHGPRLRGPTPRYAGIPRWGLTDHVDQAPVPASAKAGPSPAAVRTTLLVSL---LVFSIAVVVFVVRYVLLVINRNTLLNSV-VASASVWLGVLVSLAAIAAAGTTIVLLVRWLVARRAA-AFMHQGLPERRSARELWAGCLLPMVNLLWAPLYVIELALVEDRYTRL---RRPIVVWWIVWIVSNAISMFAFATSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFEGFEQ----KPVERPAHRWVVVNTDGRSAPA---SSVAVELDGQEPAA---------------------------------------------------------------------------------------------------------------------------- |
3N9N Chain:A ((9-521)) | PKESDRCGGCGKFTHEDKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTGHSIRYKVVAPHRYRWYSPNEKHLGIEVGSKTWIEDFITRENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEI------SMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFELLHWMYMRNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDRELRLGPEKNAILPTDDKNKIMISVRKQIEIQTKIQNAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144148 for 2406 contacts (-59.9/contact) +
2D Compatibility (PS) -35424 + (NN) -12362 + (LL) 536
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -201298.0 ( -83.67 by residue)
QMean score : 0.143
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