Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSL-MDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGL-VGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSV-IKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLLSRGK---------ARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY |
| 2JHN Chain:A ((1-295)) | MWRIELKHAVNWELKMKFFVLPELPTP-------DVVESGVWRRAIVLDGRAVAVMAYPESERTIVVEGNFENREWEAVRRKLVEYLGLQNPEELYRFMDGDEKLRMLKNRFYGFGRAGLMSMSVFEGIAKAIIQQQISFVVAEKLAAKIVGRFGDEVEWNGLKFYGFPTQEAILKAGVEGLRECG-----LSRRKAELIVEIAKEENLEELKEWGEEEAYEYLTSFKGIGRWTAELVLSIALGKNVFPADDLGVRRAVSRLYFNGEIQSAEKVREIARERFGRFARDILFYLFLYDRFFSKELV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46651 for 2272 contacts (-20.5/contact) +
2D Compatibility (PS) -29602 + (NN) -4460 + (LL) 552
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -84661.0 ( -37.26 by residue)
QMean score : 0.301
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