Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MRTFDLTAALGDR-ANQPEISRLLVAQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS |
1Y6D Chain:A ((1-114)) | MNTDVLNQQKIEELSAEIGSDNVPVLLDIFLGEMDSYIGTLTELQGSEQLLYLKEISHALKSSAASFGADRLCERAIAIDKKAKANQLQEQGMETSEMLALLHITRDAYRSWTN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3698 for 825 contacts (4.5/contact) +
2D Compatibility (PS) -11090 + (NN) 418 + (LL) 444
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -9180.0 ( -11.13 by residue)
QMean score : 0.253
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