Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPAITRKRFIAGAVCPACSEQDKIQMWEE----D--GVPHRECVACGYADTLNAQGQSIPKELGTRVNQNAPKPANPKVQSVQFFPNPKLKKKPDA |
1PQV Chain:S ((269-306)) | -------------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13147 for 435 contacts (30.2/contact) +
2D Compatibility (PS) -3073 + (NN) 981 + (LL) 2660
1D Compatibility (HY) 1200 + (ID) 50
Total energy: 14865.0 ( 34.17 by residue)
QMean score : ?
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