Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA |
| 5C3L Chain:B ((18-141)) | ---------------------------------------------------------------------------------------------------QLLCQDVENFQKFVKEQKQVQEEISRMSS------KAMLKVQEDIKALKQLLSVASSGLQRNALAIDKLKIETAEELKN-AEIALRTQKTPPGLQHENTAPADYFHTLVQQFEVQLQQYRQQIEELENHLA-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16930 for 513 contacts (33.0/contact) +
2D Compatibility (PS) -12927 + (NN) 3014 + (LL) 7844
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: 11211.0 ( 21.85 by residue)
QMean score : 0.241
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