Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MDAQAAARLGDEIAHGFGVAAMVAGAV--AGALIGAAVVAATAATGGLAAVILAGSIAAGGLSMFQIVKGLTTIFELPEPTTGVLIRGSFNVYVNSRNAMRAGDDVSATCSGLPLNHPLWPFPVLIAEGSATVYINGKPAARLQSKMVCGAHIKTGSQNTFIGGPTERVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAGVAALVGVVAIGGLMMGGMALLGDLGDRLGPGYRDLFQGVAGMALLGFGPKLAGRRPAAVTSETAQRRAYLNNKFGRSGNLDHDINYRGNRETAAKFFKSKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQYQSPGAPQGNW-----YTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAAPTDDFWSVKGQSYPAKGGAQQLFSNEKGSFGLLPREGS |
| 4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQA--------------------------------GARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPV------------ETVELPEQVDAIVSEWMGYG----------------LLHESMLSSVLHARTKWLKEGGLLLPA----SAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLE--LSRAG-LEQELEAGVGGRFRCSCYGS---------APMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSG----------EITLLPSRDNPRRLRVLLRYKVGDQE--------------------EKTKDFAMED---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86488 for 2560 contacts (-33.8/contact) +
2D Compatibility (PS) -33515 + (NN) -3863 + (LL) 6264
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -131752.0 ( -51.47 by residue)
QMean score : 0.174
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