Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDA-AAPVVAYPGCPSEHGLAAATTTQL--------SRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
2QCP Chain:X ((7-68))
------------------VISATGVVKGIDLESKKITIHHDPIA--AVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QCP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40161 for 295 contacts (-136.1/contact) +
2D Compatibility (PS) -6128 + (NN) -3843 + (LL) 6364
1D Compatibility (HY) -400 + (ID) 450
Total energy: -44618.0 ( -151.25 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_2QCP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QCP-query.scw
PDB file :
Tito_Scwrl_2QCP.pdb
: