Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFI--DQGG------------E-WLLAASV------PLEQ-----PWRGRAKLLKMAARAIDEALRGQPDLD-----CTELPLLLCVAEGDRPG--------------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLL-------------TSQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVL--KPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGD--------------------------GPNVFCHLGNDAGERAAALLSYRRVRAA |
| 2IX4 Chain:A ((1-430)) | --RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQP--PEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFASI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189434 for 3248 contacts (-58.3/contact) +
2D Compatibility (PS) -35161 + (NN) -10734 + (LL) 1092
1D Compatibility (HY) -2000 + (ID) 2650
Total energy: -238887.0 ( -73.55 by residue)
QMean score : 0.439
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