Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------MRLPANLGRLLPALCLGVLLSACS-TFGQRDPLRIDLVGLEPLPGQGMEMRF---------MVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFS------EKGTLDFSGPAVGAPKTKGL----------------------------------------------------- |
1B12 Chain:A ((2-248)) | RSFIYEPFQIPS--GSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGD-KVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDGLRLSRIGGIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19092 for 957 contacts (-19.9/contact) +
2D Compatibility (PS) -17174 + (NN) -6023 + (LL) 200
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -46089.0 ( -48.16 by residue)
QMean score : 0.181
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