Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVVLASQLPNKRNASLAPGLKQRHVTMLS--IAGVIGAGLFVGSGHAIAAAGPAALLAYLIAGTLVVLVMRMLG---------EMAVASPDTGSFSTYADRSIGRWAGFTIGWLYWWFWVLVIPLE-------AIAAAAILNAW------FPAIDTWIFALAVTFL----LTVTNLFSVAR----YGEFEFWFALLK-------VIAIIAFIVLGA-----VAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLTTMFSFMGTEIVTIAAAES-KDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLLIQVGSYQRA---------LELLDIPHAKLIVDLVVLVAVASCLNSAIY---TSSRMVFSLAKRGDAPSVLKLTNTAHVPRPAVLASTAVGFLTTIVNY--FAPEKVFTFLLASSG---AVALLVYLVIAVAQLRMRKQLQASGQPIEFRMWLYP-WLTWAVILFIVAALSIMLIMPEHRHEV----------FATALLTIF------TVCLGLLNARRKPRLGEDYAGKTARV------------------------------------------------------------------------------------------------------------------------------------- |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -388500 for 3547 contacts (-109.5/contact) +
2D Compatibility (PS) -49920 + (NN) -22723 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -472393.0 ( -133.18 by residue)
QMean score : 0.222
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