Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSL--KLDGGKGTAGTQLLPIHDDGRPADDFGRLA-VAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWGSNTRFDENRLIVSYPLSLL |
| 3SZV Chain:A ((12-401)) | -------------------------YFQGLEDLVEDSHASLELRNFYFNRDFR--------DEWAQGFLLRLESGFSEGT--VGFGVDAIGLLGFKLDS------------------QDDYAKLGLT-AKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANR-IGGRSDAFDFAGGDYRLTPAL-TASLHQGRLKDIYRQTFAGLVHTLDLG-RSLKSDLRFARASEDGGF--RELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGSD-PYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGA-ANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNF--ANDLDENRLILSYSLALW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11504 for 2792 contacts (4.1/contact) +
2D Compatibility (PS) -36609 + (NN) -851 + (LL) 1596
1D Compatibility (HY) -26000 + (ID) 7750
Total energy: -58110.0 ( -20.81 by residue)
QMean score : ?
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