Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIG--CIAVMPLAGLIGSGLGICNPYNLRIILEEA--------KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
| 1W0M Chain:B ((114-211)) | --------------------------------------------------------------------------------------------------------------------------------------GLDVVV-CAPDPRTSLAAAALGPHAVAVEP-PELIGTGRAVSR-YKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSELR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76729 for 658 contacts (-116.6/contact) +
2D Compatibility (PS) -10116 + (NN) -3988 + (LL) 11800
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -84333.0 ( -128.17 by residue)
QMean score : 0.328
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