Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIASFGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWSAERTERLSARVMPKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALVREREGFR |
2DMX Chain:A ((5-68)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN------KEEAEKKFKLVSEAYEVLSDSKKRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15882 for 381 contacts (-41.7/contact) +
2D Compatibility (PS) -7043 + (NN) -4402 + (LL) 15596
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -15531.0 ( -40.76 by residue)
QMean score : 0.649
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