Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIKGALNRIVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVLVVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLELIRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMDELVAFTAVYREENAQ |
2ELC Chain:D ((21-326)) | -----------------------VMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRV-HRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLGARG-LVVHG-EGADELVL-GENRVVEVGKG---AYALTPEEVGLKRAPLEALKGGGPEENAALARRLL---KGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYVAFLRA------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ELC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -208082 for 2834 contacts (-73.4/contact) +
2D Compatibility (PS) -33218 + (NN) -9420 + (LL) 3572
1D Compatibility (HY) -22400 + (ID) 6550
Total energy: -276098.0 ( -97.42 by residue)
QMean score : 0.559
|
|
|