Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MSITSTDICQA--ADALKGFVGFNRKTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLG------REQLQIL----LEQNINERLNIGEP--LLVYLRRQDLPEITAQRQLR- |
| 1KHI Chain:A ((27-173)) | GSASQTVTIPCHHIRLGDILILQGRPCQVIRISTSAATGQHRYLGVDLFTKQLHEESSFVSNPAPSVVVQTMLGPVFKQYRVLDMQDGSIVAMTETGDVKQNLPVIDQSSLWNRLQKAFESGRGSVRVLVVSDHGREMAVDMKVVHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35724 for 609 contacts (-58.7/contact) +
2D Compatibility (PS) -11048 + (NN) 526 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -49896.0 ( -81.93 by residue)
QMean score : 0.328
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