Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADGIRFWVPVNGSHTRNSEFPRSELRETLSSGRPYNWRYARADNWLEATLRIEAVPSTRRMIIGQIHSDGSNSGQAAPLVKLLYQLRLDQGRVQALVRERPDDGGTRAYTLMDGIPLGQPFSYRIGVSRSGLLSVSVNGSALEQQLDPQWAYQGLYFKAGLYLQDNRGPSSEGGRATFSELRVSHQ |
1MS9 Chain:A ((494-579)) | ------------------------------------------------------------------------------HAFTLVASVTIHEVPKG-ASPLLGASLDSS---GGKKLLGLSYDKR---HQWQPIYGS----T--PV-TPTGSWEMGKRYHVVLTMA-NKIGSVYIDGEPLEGSGQTVVPDERTPDISHFYVGGYKRSGMPTDSRVTVNNVLLYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58958 for 551 contacts (-107.0/contact) +
2D Compatibility (PS) -9006 + (NN) -2177 + (LL) 3768
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -72473.0 ( -131.53 by residue)
QMean score : 0.310
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