Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
3IX3 Chain:B ((7-169))
------FLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEH----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98232 for 1239 contacts (-79.3/contact) +
2D Compatibility (PS) -17165 + (NN) -3502 + (LL) 6192
1D Compatibility (HY) -22800 + (ID) 8150
Total energy: -143657.0 ( -115.95 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3IX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX3-query.scw
PDB file :
Tito_Scwrl_3IX3.pdb
: