Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALARSGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWAQSRDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRA----NGLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHL--ALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
1HSL Chain:A ((1-238)) | --------AIPQKIRIGTDPTYA-------------------PFESKNAQGELVGFDIDLAKELCKRINTQCTFVEN----PLDALIPSLKAKKIDAIMSSLSITEKRQQE-----IAFTDKLYAADSRLVVAKNS-DIQP--TVASLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYF-----------------------DFDVYGG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111702 for 1895 contacts (-58.9/contact) +
2D Compatibility (PS) -24968 + (NN) -11344 + (LL) 6652
1D Compatibility (HY) -4000 + (ID) 1700
Total energy: -147062.0 ( -77.61 by residue)
QMean score : 0.468
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