Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGW-----------RAAGKSGLKKDCLAYIEEVWTDM---RPLSLRQHMDKAAG-----------------------------
2DST Chain:A ((2-123))
RRAGYLHLYGLNLVFDRVGKGPPVLLVAEE-ASRWPE--ALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAEVLSSKLSYG
General information:
TITO was launched using:
RESULT:
Template:
2DST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3897 for 385 contacts (-10.1/contact) +
2D Compatibility (PS) -6922 + (NN) 2594 + (LL) 276
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -12949.0 ( -33.63 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2DST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DST-query.scw
PDB file :
Tito_Scwrl_2DST.pdb
: