Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MNSKNTICLWYDSAALEAATFYAETFPDSA-VLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAFRHSEAFSFQVATDDQAETD----RLWNAIVDNGGEESACGWCRDKW--GISWQITP-----RVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
3C19 Chain:A ((2-178))
SLGLDYEPSHLMFLVTVLDDRDGEVLGDAIQKLIEREEVLACHAVPCVTKKNRPGHVLVVLVDGGEDPDRVAEDVARDIMVLTGSTGVDRFDADGVYSVPSRFEDVRVVYGEREWRVSVKIAETEEGEVVTVKAEFDECREIGEETGIPPREVKAMVEAAARVGGWVDLKEREIKVQ-
General information:
TITO was launched using:
RESULT:
Template:
3C19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51385 for 1056 contacts (-48.7/contact) +
2D Compatibility (PS) -16114 + (NN) 901 + (LL) -172
1D Compatibility (HY) 1600 + (ID) 1400
Total energy: -66570.0 ( -63.04 by residue)
QMean score : 0.137
(partial model without unconserved sides chains):
PDB file :
Tito_3C19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C19-query.scw
PDB file :
Tito_Scwrl_3C19.pdb
: