Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALG-IE-GVERLAVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP--DDTEMQRLLEKADLYLVPNMNPDGAFHGN-----LR--------TNAAGQDLNRAWLEP------------------SAERSPEVWFVQQEMKRH-GVDLFLDIHGDEEI-PHVFAAGCEGNPGYTPRLERLEQRFREELMARGEFQIRHGYPRSAP---GQANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
| 1M4L Chain:A ((5-304)) | --------------------------------------------------------------------------------------------------------NTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDK-TELNQVAKSAVAALKSLY----GTSYKYGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDTG-----RYGFLLPASQIIPTAQETWLGVLTIMEHT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103694 for 2174 contacts (-47.7/contact) +
2D Compatibility (PS) -28096 + (NN) -10098 + (LL) 7228
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -144110.0 ( -66.29 by residue)
QMean score : 0.503
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