Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVQVITRDGEAEYAVLPWAEYQALLAAAGRPAASVAVETTAPAPPSASLLERREARGLSLEQVAREVGISPSYMAMIERGEREASEAILFALERVLGKATGA
3OP9 Chain:A ((6-68))
-----------------------------------------IQHQFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKLIRLATYFHLSID-
General information:
TITO was launched using:
RESULT:
Template:
3OP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17729 for 376 contacts (-47.2/contact) +
2D Compatibility (PS) -6960 + (NN) -4910 + (LL) 4028
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -29671.0 ( -78.91 by residue)
QMean score : 0.791
(partial model without unconserved sides chains):
PDB file :
Tito_3OP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OP9-query.scw
PDB file :
Tito_Scwrl_3OP9.pdb
: