Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLKQATPTYSSRTADKFVVRLPEGMREQIAEVARSHHRSMNSEIIARLEQSLLQEGALQDNLGVRLDSPELSLHERELLQRFRQLTHRQQNALVALIAHDAELAQA
1NLA Chain:A ((4-50))
------------MSKMPQFLNRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGR-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6849 for 232 contacts (-29.5/contact) +
2D Compatibility (PS) -5133 + (NN) -1668 + (LL) 5284
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -12716.0 ( -54.81 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1NLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NLA-query.scw
PDB file :
Tito_Scwrl_1NLA.pdb
: