Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGKTV-----AWIGDG-NNMCNSYIEAALKFDFQLRVACPEGYEPKAEFVAL-------AGDRLRVVRDPREAVAGAHLVSTDVWASMGQEDEA-AARIALFRPYQVNAALLDGAAD-DVLFMHCLPAH-----------------RGEEISEELLDDPRSVAWDQAENRLHAQKALLELLIEHAHYA |
| 4JQO Chain:A ((32-352)) | ---RNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHS---QGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVM---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154182 for 2458 contacts (-62.7/contact) +
2D Compatibility (PS) -31487 + (NN) -15110 + (LL) 1608
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -230371.0 ( -93.72 by residue)
QMean score : 0.505
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