Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGR-ALS-HY---------------EVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQ----GAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDNVATPKKAP
3ZEU Chain:B ((1-140))
-MRVLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEAGLTASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHT----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101939 for 826 contacts (-123.4/contact) +
2D Compatibility (PS) -12484 + (NN) -2056 + (LL) 7160
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -116319.0 ( -140.82 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_3ZEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZEU-query.scw
PDB file :
Tito_Scwrl_3ZEU.pdb
: