Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDRLQIEDLLLGDGKEVVK-GALITTQYKGTLEDGTLFDSSYERGRPFQCVIGTGRVIKGWDQGLMGMKVGGKRRLFVPSHLAYGERQVGAHIKPHSNLLFEIELLEVLTRDD
4FAP Chain:A ((2-106))
----VQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL-----
General information:
TITO was launched using:
RESULT:
Template:
4FAP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58889 for 757 contacts (-77.8/contact) +
2D Compatibility (PS) -11009 + (NN) 1202 + (LL) 328
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -78818.0 ( -104.12 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4FAP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FAP-query.scw
PDB file :
Tito_Scwrl_4FAP.pdb
: