Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDGPLSSPFGLRRFFNGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYF-FNGKTVFVDHGQG-FISMFCHLSKIDVKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLND----ARVDPAIFIGAFQP |
| 1QWY Chain:A ((163-289)) | --------------------------------------------------------------------------------------------------------------------------------------------------------DASWLTSRKQLQPYGQYH-----GGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59352 for 923 contacts (-64.3/contact) +
2D Compatibility (PS) -13113 + (NN) -4974 + (LL) 10156
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -69883.0 ( -75.71 by residue)
QMean score : 0.515
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